Making the discoveries that defeat cancer

  • Home »
  • Research »
  • Repository

  • Administrators Login

  • Repository Homepage
  • About the Repository
  • Browse the Repository
  • Search the Repository
  • Contribute an Article
  • Missing Publications
  • Repository Help

LocusExplorer: a user-friendly tool for integrated visualization of human genetic association data and biological annotations

Tools
- Tools
+ Tools

Dadaev, T., Leongamornlert, D. A., Saunders, E. J., Eeles, R., Kote-Jarai, Z. (2016) LocusExplorer: a user-friendly tool for integrated visualization of human genetic association data and biological annotations. BIOINFORMATICS, 32 (6). pp. 949-951. ISSN 1367-4803

[img]
Preview
Text
14991.pdf

Download (166kB) | Preview
Official URL: https://bioinformatics.oxfordjournals.org/content/...

Abstract

In this article, we present LocusExplorer, a data visualization and exploration tool for genetic association data. LocusExplorer is written in R using the Shiny library, providing access to powerful R-based functions through a simple user interface. LocusExplorer allows users to simultaneously display genetic, statistical and biological data for humans in a single image and allows dynamic zooming and customization of the plot features. Publication quality plots may then be produced in a variety of file formats.

Item Type: Article
Authors (ICR Faculty only): Eeles, Ros and Kote-Jarai, ZSofia
All Authors: Dadaev, T., Leongamornlert, D. A., Saunders, E. J., Eeles, R., Kote-Jarai, Z.
Additional Information: ISI Document Delivery No.: DH7LI Times Cited: 0 Cited Reference Count: 15 Dadaev, Tokhir Leongamornlert, Daniel A. Saunders, Edward J. Eeles, Rosalind Kote-Jarai, Zsofia 0 OXFORD UNIV PRESS OXFORD BIOINFORMATICS
Uncontrolled Keywords: RESOURCE UPDATE SNPS SETS
Research teams: ICR divisions > Genetics and Epidemiology > Oncogenetics
ICR divisions > Radiotherapy and Imaging > Oncogenetics
Depositing User: Barry Jenkins
Date Deposited: 25 Apr 2016 09:35
Last Modified: 25 Apr 2016 09:42
URI: http://publications.icr.ac.uk/id/eprint/14991

Actions (login required)

View Item View Item
The Royal Marsden - NHS foundation trust